Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | I4I81_09510 | Not Available | Positive | 2006442 - 2006846 | 14867.6 |
| helix-turn-helix domain-containing protein | I4I81_09515 | Not Available | Negative | 2006806 - 2007229 | 14935.8 |
| alpha/beta hydrolase | I4I81_09520 | I6YGS0 | Positive | 2007247 - 2008008 | 27052.2 |
| tigr03668 family ppox class f420-dependent oxidoreductase | I4I81_09525 | Not Available | Negative | 2008033 - 2008458 | 15300.2 |
| smp-30/gluconolactonase/lre family protein | I4I81_09530 | D4GP31 | Negative | 2008459 - 2009331 | 31137.6 |
| dipeptidase | I4I81_09535 | P31430 | Negative | 2009334 - 2010413 | 38230.9 |
| pirin family protein | I4I81_09540 | Q9SEE4 | Positive | 2010495 - 2011472 | 34391.0 |
| n-acetyltransferase | I4I81_09545 | Not Available | Positive | 2011465 - 2011773 | 10925.0 |
| atp-dependent helicase | I4I81_09550 | P94593 | Positive | 2012046 - 2015099 | 109935.0 |
| swim zinc finger family protein | I4I81_09555 | O53500 | Positive | 2015092 - 2015913 | 29422.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
