Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1116 domain-containing protein | I4I81_09310 | P77221 | Negative | 1962297 - 1963688 | 47797.0 |
| argininosuccinate lyase | I4I81_09315 | A3CTT5 | Negative | 1963688 - 1965199 | 54826.9 |
| pyridoxal-phosphate dependent enzyme | I4I81_09320 | O42889 | Negative | 1965196 - 1967490 | 78386.8 |
| hypothetical protein | I4I81_09325 | Not Available | Negative | 1967475 - 1968395 | 32909.2 |
| phosphosulfolactate synthase | I4I81_09330 | Q9AF21 | Negative | 1968410 - 1969195 | 26979.0 |
| hypothetical protein | I4I81_09335 | Q55946 | Positive | 1969243 - 1970220 | 33290.9 |
| hypothetical protein | I4I81_09340 | Not Available | Negative | 1970225 - 1970548 | 11609.6 |
| osmc family protein | I4I81_09345 | Not Available | Positive | 1970633 - 1971052 | 14541.4 |
| nickel pincer cofactor biosynthesis protein larc | I4I81_09350 | A1SD28 | Negative | 1970957 - 1972117 | 39742.8 |
| nickel pincer cofactor biosynthesis protein larb | I4I81_09355 | F9UST0 | Negative | 1972114 - 1972779 | 22014.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
