Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | I4I81_08960 | P0ACN9 | Negative | 1883235 - 1884284 | 36700.9 |
| extracellular solute-binding protein | I4I81_08965 | P9WGU8 | Positive | 1884669 - 1885964 | 45352.8 |
| sugar abc transporter permease | I4I81_08970 | P9WG02 | Positive | 1886063 - 1886923 | 31328.8 |
| carbohydrate abc transporter permease | I4I81_08975 | P9WG00 | Positive | 1886924 - 1887757 | 30007.0 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | I4I81_08980 | P9WQI2 | Positive | 1887766 - 1889007 | 45957.7 |
| hypothetical protein | I4I81_08985 | Not Available | Negative | 1889058 - 1890251 | 42729.0 |
| duf389 domain-containing protein | I4I81_08990 | Not Available | Negative | 1890295 - 1891236 | 31895.8 |
| aspartate--trna ligase | I4I81_08995 | A4FBC3 | Negative | 1891243 - 1893042 | 65439.2 |
| intein-containing rv2578c family radical sam protein | I4I81_09000 | P9WL78 | Negative | 1893195 - 1895237 | 72549.2 |
| gluconokinase | I4I81_09005 | Q5FQ97 | Positive | 1895321 - 1895845 | 18828.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
