Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fused mfs/spermidine synthase | I4I81_08860 | Q7NQK7 | Positive | 1863481 - 1864320 | 29263.9 |
| endolytic transglycosylase mltg | I4I81_08865 | P44720 | Negative | 1864334 - 1865608 | 44037.5 |
| holliday junction resolvase ruvx | I4I81_08870 | C0ZZA9 | Negative | 1865868 - 1866299 | 14911.1 |
| alanine--trna ligase | I4I81_08875 | A4FBD3 | Negative | 1866302 - 1868968 | 94483.0 |
| hypothetical protein | I4I81_08880 | Not Available | Negative | 1869018 - 1869314 | 10140.1 |
| duf948 domain-containing protein | I4I81_08885 | Not Available | Negative | 1869385 - 1869804 | 14526.8 |
| rna polymerase sigma factor shba | I4I81_08890 | P66812 | Negative | 1869939 - 1870634 | 24684.6 |
| tetr family transcriptional regulator | I4I81_08895 | Q0S7V2 | Positive | 1870948 - 1871640 | 25167.9 |
| dnrlre domain-containing protein | I4I81_08900 | Not Available | Positive | 1871773 - 1872867 | 37114.6 |
| ornithine--oxo-acid transaminase | I4I81_08905 | Q89RB7 | Negative | 1872854 - 1874083 | 42329.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
