Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotate dehydrogenase | I4I81_08660 | B3E4T4 | Negative | 1824712 - 1825728 | 36812.2 |
| helix-turn-helix domain-containing protein | I4I81_08665 | Not Available | Negative | 1825795 - 1825932 | 4835.72 |
| ph domain-containing protein | I4I81_08670 | P9WLY0 | Negative | 1826050 - 1826532 | 17190.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | I4I81_08675 | A4FBK5 | Negative | 1826529 - 1827011 | 16483.6 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | I4I81_08680 | Q5YTP3 | Negative | 1827085 - 1828332 | 44532.1 |
| riboflavin synthase | I4I81_08685 | P65328 | Negative | 1828389 - 1829006 | 21123.3 |
| ribulose-phosphate 3-epimerase | I4I81_08690 | P65761 | Negative | 1829085 - 1829771 | 23987.6 |
| rsmb/nop family class i sam-dependent rna methyltransferase | I4I81_08695 | P9WGX2 | Negative | 1829790 - 1831277 | 52013.1 |
| methionyl-trna formyltransferase | I4I81_08700 | A4FBJ4 | Negative | 1831274 - 1832200 | 32262.7 |
| peptide deformylase | I4I81_08705 | A0LUE1 | Negative | 1832211 - 1832759 | 19998.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
