Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | I4I81_08460 | Q0SBZ1 | Negative | 1783166 - 1784158 | 34109.8 |
| iron abc transporter permease | I4I81_08465 | P21409 | Negative | 1784182 - 1785621 | 49381.3 |
| extracellular solute-binding protein | I4I81_08470 | P21408 | Negative | 1785747 - 1786793 | 35920.3 |
| s9 family peptidase | I4I81_08475 | A1CSW4 | Positive | 1786868 - 1788886 | 71981.2 |
| duf305 domain-containing protein | I4I81_08480 | Not Available | Negative | 1788875 - 1789507 | 21574.8 |
| hypothetical protein | I4I81_08485 | Not Available | Positive | 1789634 - 1791025 | 48969.6 |
| helix-turn-helix domain-containing protein | I4I81_08490 | Q45604 | Positive | 1791102 - 1791908 | 29688.7 |
| hypothetical protein | I4I81_08495 | P9WLG4 | Negative | 1791983 - 1792879 | 33065.8 |
| protoheme ix farnesyltransferase | I4I81_08500 | A4F9B0 | Negative | 1793131 - 1794090 | 34238.9 |
| transketolase | I4I81_08505 | P59956 | Positive | 1794295 - 1796400 | 74804.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
