Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | I4I81_08360 | O87590 | Positive | 1762884 - 1764269 | 49158.3 |
| extracellular solute-binding protein | I4I81_08365 | P29822 | Positive | 1764389 - 1765684 | 44251.2 |
| sugar abc transporter permease | I4I81_08370 | P94529 | Positive | 1765699 - 1766640 | 34740.5 |
| carbohydrate abc transporter permease | I4I81_08375 | Q9KEE9 | Positive | 1766784 - 1767524 | 25817.3 |
| beta-glucosidase | I4I81_08380 | P94248 | Positive | 1767521 - 1768990 | 52591.8 |
| llm class flavin-dependent oxidoreductase | I4I81_08385 | Q46FV4 | Negative | 1769419 - 1770327 | 31934.8 |
| metal-sulfur cluster assembly factor | I4I81_08390 | A0A0H2XI17 | Negative | 1770345 - 1770773 | 15042.6 |
| suf system nifu family fe-s cluster assembly protein | I4I81_08395 | O32163 | Negative | 1770770 - 1771222 | 16231.3 |
| cysteine desulfurase | I4I81_08400 | P63517 | Negative | 1771225 - 1772472 | 44363.1 |
| fe-s cluster assembly atpase sufc | I4I81_08405 | P80866 | Negative | 1772472 - 1773233 | 27006.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
