Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proteasome atpase | I4I81_07860 | C6WIC8 | Negative | 1658134 - 1659999 | 68518.0 |
| trna (adenine-n1)-methyltransferase | I4I81_07865 | P9WFZ0 | Negative | 1660112 - 1660978 | 31253.2 |
| hypothetical protein | I4I81_07870 | Not Available | Negative | 1660975 - 1661481 | 16298.9 |
| recb family exonuclease | I4I81_07875 | Q05283 | Positive | 1661480 - 1662487 | 36509.5 |
| thioesterase family protein | I4I81_07880 | Not Available | Positive | 1662494 - 1663303 | 28917.4 |
| atp phosphoribosyltransferase | I4I81_07885 | Q5YUV9 | Negative | 1663310 - 1664194 | 32488.9 |
| phosphoribosyl-atp diphosphatase | I4I81_07890 | A4FBW7 | Negative | 1664221 - 1664484 | 9535.38 |
| had family phosphatase | I4I81_07895 | Q94529 | Negative | 1664651 - 1665304 | 23032.5 |
| methionine synthase | I4I81_07900 | O33259 | Negative | 1665327 - 1668863 | 128603.0 |
| pac2 family protein | I4I81_07905 | Not Available | Positive | 1668978 - 1669853 | 32003.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
