Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquitin-like protein pup | I4I81_07810 | A4FBY0 | Negative | 1651307 - 1651504 | 6985.7 |
| proteasome accessory factor pafa2 | I4I81_07815 | Q53081 | Negative | 1651592 - 1653079 | 54694.6 |
| nad(p)-dependent alcohol dehydrogenase | I4I81_07820 | Q0KDL6 | Positive | 1653253 - 1654320 | 37577.2 |
| marr family transcriptional regulator | I4I81_07825 | O31541 | Negative | 1654364 - 1654861 | 18507.9 |
| ycei family protein | I4I81_07830 | P0A8X3 | Positive | 1654951 - 1655514 | 19671.9 |
| helix-turn-helix domain-containing protein | I4I81_07835 | P43458 | Positive | 1655610 - 1656359 | 25452.7 |
| voc family protein | I4I81_07840 | Not Available | Negative | 1656302 - 1656697 | 13771.3 |
| helix-turn-helix domain-containing protein | I4I81_07845 | Q9ES88 | Positive | 1657027 - 1657188 | 5366.77 |
| preprotein translocase | I4I81_07850 | Q9AD90 | Negative | 1657200 - 1657463 | 9887.51 |
| phosphatase | I4I81_07855 | Q60280 | Positive | 1657620 - 1658075 | 16864.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
