Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating dioxygenase subunit alpha | I4I81_06560 | P0ABR8 | Negative | 1380370 - 1381662 | 47885.6 |
| hypothetical protein | I4I81_06565 | P40873 | Negative | 1381685 - 1382122 | 15892.9 |
| hypothetical protein | I4I81_06570 | P39592 | Positive | 1382045 - 1382629 | 19772.7 |
| response regulator transcription factor | I4I81_06575 | P0C0Z1 | Negative | 1382598 - 1383203 | 21221.7 |
| gaf domain-containing protein | I4I81_06580 | P9WGK2 | Negative | 1383197 - 1384300 | 38251.7 |
| amp-binding protein | I4I81_06585 | O07610 | Negative | 1384333 - 1385847 | 52746.4 |
| hypothetical protein | I4I81_06590 | E1XUJ2 | Positive | 1385953 - 1387443 | 55242.0 |
| sco family protein | I4I81_06595 | Q8VCL2 | Positive | 1387440 - 1387958 | 18888.4 |
| lysr family transcriptional regulator | I4I81_06600 | Q04778 | Negative | 1388403 - 1389332 | 33086.0 |
| coa transferase subunit a | I4I81_06605 | B0RVK4 | Positive | 1389397 - 1390062 | 23106.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
