Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | I4I81_00460 | P9WL22 | Positive | 105989 - 107056 | 37021.0 |
| cpbp family intramembrane metalloprotease | I4I81_00465 | P13974 | Positive | 107745 - 108467 | 24644.0 |
| 30s ribosomal protein s16 | I4I81_00470 | A4FMF1 | Positive | 108614 - 109096 | 17456.7 |
| rna-binding protein | I4I81_00475 | P67237 | Positive | 109093 - 109332 | 8492.26 |
| ribosome maturation factor rimm | I4I81_00480 | B1MDI4 | Positive | 109351 - 109899 | 19251.1 |
| methyltransferase domain-containing protein | I4I81_00485 | O53532 | Negative | 109909 - 110907 | 35153.0 |
| helix-turn-helix domain-containing protein | I4I81_00490 | Not Available | Positive | 110930 - 111145 | 7772.22 |
| clp protease | I4I81_00495 | P24428 | Positive | 111159 - 111716 | 20380.3 |
| trna (guanosine(37)-n1)-methyltransferase trmd | I4I81_00500 | A4FME8 | Positive | 111743 - 112480 | 26487.5 |
| 50s ribosomal protein l19 | I4I81_00505 | A4FME7 | Positive | 112603 - 112962 | 13452.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
