Mucilaginibacter ginkgonis HMF7856

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter ginkgonis HMF7856 is a Gram-negative, rod-shaped bacterium. It is characterized by having a single replicon, indicating a streamlined genomic structure. The organism has been cataloged under the accession number CP066775.1, which provides a reference for its genomic data. Mucilaginibacter ginkgonis is part of a genus known for its diverse ecological roles, particularly in soil and plant-associated environments. The genus Mucilaginibacter is often associated with polysaccharide degradation, suggesting that M. ginkgonis may play a role in the breakdown of organic matter, contributing to nutrient cycling in its habitat. The understanding of Mucilaginibacter ginkgonis HMF7856’s physiological traits underscores its potential ecological importance, particularly in environments where it may interact with plant roots or organic substrates. Its Gram-negative nature may also suggest a level of resilience and adaptability in various environmental conditions. Overall, Mucilaginibacter ginkgonis represents an interesting subject for further research into its ecological functions and potential applications in microbial biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter ginkgonis
StrainHMF7856

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter ginkgonis HMF7856, Complete Genome

Gene Summary

Adenine Count

1030236 bp

Thymine Count

1044239 bp

Guanine Count

810171 bp

Cytosine Count

813138 bp

Genome Length

3697784 bp

Protein-coding Genes

3380 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inorganic diphosphataseGO620_016215Q72MG4Positive3490642 - 349118720784.0
hlyc/corc family transporterGO620_016220P54428Positive3491197 - 349253449647.0
16s rrna (uracil(1498)-n(3))-methyltransferaseGO620_016225P37995Positive3492585 - 349329226797.1
duf4159 domain-containing proteinGO620_016230Not AvailablePositive3493289 - 349394825086.0
biotin/lipoyl-binding proteinGO620_016235Q57111Positive3493950 - 349445018262.1
sumf1/egtb/pvdo family nonheme iron enzymeGO620_016240Q8R0F3Negative3494519 - 349616860831.3
type ix secretion system outer membrane channel protein porvGO620_016245Not AvailablePositive3496394 - 349757542707.1
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseGO620_016250Q11Q93Positive3497572 - 349805417415.1
ubiquinone-dependent pyruvate dehydrogenaseGO620_016255P07003Negative3498051 - 349978762326.5
(e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseGO620_016260A6LGR5Negative3499873 - 350193976405.2

Displaying genes 3241 – 3250 of 3428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.