Mucilaginibacter ginkgonis HMF7856

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter ginkgonis HMF7856 is a Gram-negative, rod-shaped bacterium. It is characterized by having a single replicon, indicating a streamlined genomic structure. The organism has been cataloged under the accession number CP066775.1, which provides a reference for its genomic data. Mucilaginibacter ginkgonis is part of a genus known for its diverse ecological roles, particularly in soil and plant-associated environments. The genus Mucilaginibacter is often associated with polysaccharide degradation, suggesting that M. ginkgonis may play a role in the breakdown of organic matter, contributing to nutrient cycling in its habitat. The understanding of Mucilaginibacter ginkgonis HMF7856’s physiological traits underscores its potential ecological importance, particularly in environments where it may interact with plant roots or organic substrates. Its Gram-negative nature may also suggest a level of resilience and adaptability in various environmental conditions. Overall, Mucilaginibacter ginkgonis represents an interesting subject for further research into its ecological functions and potential applications in microbial biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter ginkgonis
StrainHMF7856

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter ginkgonis HMF7856, Complete Genome

Gene Summary

Adenine Count

1030236 bp

Thymine Count

1044239 bp

Guanine Count

810171 bp

Cytosine Count

813138 bp

Genome Length

3697784 bp

Protein-coding Genes

3380 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phytoene desaturaseGO620_000010A0A0A1GKA2Positive647 - 214356054.5
sigma-70 family rna polymerase sigma factorGO620_000015Q7AKG9Negative2201 - 274020928.2
udp-n-acetylmuramate dehydrogenaseGO620_000020A5FNG4Negative3014 - 403037490.7
dtdp-4-dehydrorhamnose 3,5-epimeraseGO620_000025P37780Negative4048 - 459620612.6
duf4286 family proteinGO620_000030Not AvailableNegative4600 - 490211787.9
tetratricopeptide repeat proteinGO620_000035Not AvailableNegative4921 - 673569109.5
s9 family peptidaseGO620_000040V5YMB3Positive6878 - 876471881.9
hamp domain-containing histidine kinaseGO620_000045Q08408Positive8773 - 1041363761.6
response regulator transcription factorGO620_000050A7WWQ5Positive10417 - 1110626881.4
duf2807 domain-containing proteinGO620_000055Not AvailablePositive11174 - 1187523963.1

Displaying genes 1 – 10 of 3428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.