Mucilaginibacter paludis DSM 18603

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter paludis DSM 18603 is a Gram-negative, rod-shaped bacterium that does not form spores and exhibits facultative aerobic/anaerobic metabolism. This microbe thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a heterotroph, Mucilaginibacter paludis relies on organic compounds as its energy source, which suggests it plays a role in the decomposition of organic matter within its habitat. The facultative nature of its oxygen requirement allows Mucilaginibacter paludis to adapt to varying oxygen levels, making it versatile in different ecological niches. This adaptability may enable it to thrive in both oxygen-rich and oxygen-poor environments, contributing to its survival in diverse habitats, possibly including soils, sediments, or other organic-rich substrates. Understanding the metabolic capabilities and environmental tolerances of Mucilaginibacter paludis can provide insights into its potential roles in nutrient cycling and organic matter degradation in ecosystems where it is present. Its ability to function in varying oxygen conditions may also suggest a significant role in biogeochemical processes, particularly in environments that undergo periodic anoxia.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter paludis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Mucilaginibacter paludis DSM 18603

Accession NumberAEIH00000000.2

Gene Summary

Adenine Count

2395948 bp

Thymine Count

2408374 bp

Guanine Count

1804390 bp

Cytosine Count

1799010 bp

Genome Length

8407722 bp

Protein-coding Genes

6951 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical protein [mucilaginibacter paludis]-Not Available+179 - 60116389.8
hypothetical protein [mucilaginibacter paludis]-Not Available+629 - 116220262.3
ph domain-containing protein [mucilaginibacter paludis]-Not Available-1816 - 234619716.9
flavodoxin family protein [mucilaginibacter paludis]-Not Available-2860 - 340519529.7
duf4914 family protein [mucilaginibacter paludis]-Not Available-3543 - 546571663.1
ferredoxin [mucilaginibacter paludis]-Not Available-5761 - 60069185.28
u32 family peptidase [mucilaginibacter paludis]-P59916-6011 - 724945361.7
hypothetical protein [mucilaginibacter paludis]-Not Available-7444 - 773110481.8
arac family transcriptional regulator [chryseobacterium arachidis]-Not Available-8087 - 897434172.8
aldo/keto reductase [chryseobacterium hispalense]-Not Available-8983 - 998736910.4

Displaying genes 1 – 10 of 14111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

241 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da

Displaying 1–10 of 241 metabolites