Cetobacterium somerae

Gram-negativeAnaerobe

Kingdom

Fusobacteriati

Phylum

Fusobacteriota

Class

Fusobacteriia

Order

Fusobacteriales

Family

Fusobacteriaceae

Genus

Cetobacterium

Description

Cetobacterium somerae is a Gram-negative, anaerobic bacterium characterized by its adaptation to low-oxygen environments. It possesses a total of eight replicons, which are essential for its genetic stability and replication processes. The presence of multiple replicons can play a role in the organism's ability to thrive under anaerobic conditions, as it may facilitate the management of genetic material in fluctuating environments. In terms of ecological role, C. somerae is often found in the gastrointestinal tracts of various fish species. Its anaerobic nature suggests it plays a significant role in the fermentation processes occurring in these environments, contributing to the complex microbial ecosystems present in aquatic habitats. The ability to survive and function effectively in such anoxic conditions allows C. somerae to participate in nutrient cycling within the gut microbiome of fish, which may have implications for the health and nutrition of its hosts. Furthermore, the genetic diversity indicated by the eight different accessions (CP173065.2, CP173062.2, CP173060.2, CP173070.2, CP173063.2, CP173069.2, CP173066.2, and CP173064.2) suggests that there may be various strains of C. somerae adapted to specific environments or host species. This diversity could be crucial for understanding the ecological interactions and potential applications of this bacterium in aquaculture and environmental microbiology. Overall, C. somerae's traits highlight its importance in anaerobic ecosystems and its role in the digestive processes of aquatic organisms.

Taxonomy

KingdomFusobacteriati
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyFusobacteriaceae
GenusCetobacterium
SpeciesCetobacterium somerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

245532 bp

Thymine Count

245250 bp

Guanine Count

98699 bp

Cytosine Count

98224 bp

Genome Length

687705 bp

Protein-coding Genes

624 genes

Non-Coding Genes

29 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa dehydrogenaseACIE8Z_10690P52042Positive13 - 115841533.1
electron transfer flavoprotein subunit beta/fixa family proteinACIE8Z_10685P52040Positive1178 - 196328693.9
electron transfer flavoprotein subunit alpha/fixb family proteinACIE8Z_10680P71153Positive1986 - 299336224.9
short-chain fatty acid transporterACIE8Z_10675P44051Positive3072 - 445449557.6
apc family permeaseACIE8Z_10670O34739Negative4492 - 582047922.2
hypothetical proteinACIE8Z_10665Not AvailablePositive6002 - 61395404.81
murr/rpir family transcriptional regulatorACIE8Z_10660P26833Negative6166 - 701132214.8
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeACIE8Z_10655Q81MS2Negative7029 - 938087384.2
dj-1/pfpi family proteinACIE8Z_10650Q54MG7Positive9538 - 1013121989.9
fkbp-type peptidyl-prolyl cis-trans isomeraseACIE8Z_10645Q7CFU4Positive10227 - 1071218358.9

Displaying genes 1 – 10 of 3062 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.