Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1, Complete Genome
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--trna ligase | SHINM13_20490 | A0M5I5 | Negative | 2355151 - 2357784 | 100243.0 |
| hypothetical protein | SHINM13_20500 | Not Available | Positive | 2357997 - 2358380 | 13792.6 |
| aminotransferase | SHINM13_20510 | P53001 | Positive | 2358594 - 2359769 | 43249.8 |
| gtp cyclohydrolase 1 | SHINM13_20520 | A5FHM7 | Positive | 2359923 - 2360594 | 25172.2 |
| cysteine--trna ligase | SHINM13_20530 | A5FHM5 | Positive | 2360749 - 2362227 | 55771.5 |
| prolipoprotein diacylglyceryl transferase | SHINM13_20540 | Q5L7B9 | Positive | 2362557 - 2363480 | 35056.9 |
| prolyl endopeptidase | SHINM13_20550 | P27195 | Negative | 2363568 - 2365718 | 79630.1 |
| protein translocase subunit secdf | SHINM13_20560 | D0MIN4 | Negative | 2365791 - 2368763 | 108526.0 |
| malate dehydrogenase | SHINM13_20570 | Q25QU7 | Negative | 2368988 - 2369923 | 32701.5 |
| dna gyrase subunit b | SHINM13_20580 | P05652 | Negative | 2369972 - 2371915 | 72141.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
