Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1, Complete Genome
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | SHINM13_00010 | A6GYW8 | Positive | 101 - 1528 | 54516.7 |
| protein-tyrosine-phosphatase | SHINM13_00020 | Q55535 | Positive | 1536 - 2003 | 17275.6 |
| s-adenosylmethionine-dependent methyltransferase | SHINM13_00030 | Q8KA29 | Positive | 2036 - 2758 | 26671.7 |
| short-chain dehydrogenase | SHINM13_00040 | Q16698 | Positive | 2849 - 3730 | 31908.6 |
| uridine kinase | SHINM13_00050 | A0Q140 | Positive | 3883 - 4494 | 23151.8 |
| hypothetical protein | SHINM13_00060 | Not Available | Positive | 4623 - 4949 | 13377.9 |
| methylmalonyl-coa mutase | SHINM13_00070 | Q59676 | Positive | 4988 - 6352 | 52159.5 |
| methylmalonyl-coa mutase | SHINM13_00080 | Q59677 | Positive | 6398 - 8524 | 78575.9 |
| peptidoglycan-binding protein lysm | SHINM13_00090 | Not Available | Negative | 8584 - 9243 | 25205.2 |
| aminodeoxychorismate lyase | SHINM13_00100 | P44720 | Negative | 9451 - 10491 | 39608.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
