Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium ammonificans SHINM13 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This species is part of the Flavobacterium genus, notable for its role in various ecological processes, including the degradation of organic matter. The strain has a single replicon, indicating a streamlined genomic organization that is typical for many bacteria within its genus. The genomic data for Flavobacterium ammonificans SHINM13 is accessible under the accession number AP025185.1, providing a resource for further genomic studies and analysis. In the ecological context, the motility enabled by flagella may enhance the bacterium's ability to navigate its environment, potentially allowing it to access nutrient-rich niches or evade unfavorable conditions. This capability could play a significant role in its survival and function within microbial communities, particularly in environments where organic matter decomposition is crucial. The ecological implications of such traits highlight the importance of Flavobacterium ammonificans SHINM13 in nutrient cycling and organic matter turnover in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium ammonificans
StrainSHINM13, Flavobacterium Strains: 1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1, Complete Genome

Gene Summary

Adenine Count

785786 bp

Thymine Count

795241 bp

Guanine Count

413838 bp

Cytosine Count

414543 bp

Genome Length

2409408 bp

Protein-coding Genes

2093 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSHINM13_20190Not AvailablePositive2321056 - 232149617956.3
hypothetical proteinSHINM13_20200Not AvailableNegative2321497 - 232191315850.9
2-nitropropane dioxygenaseSHINM13_20210Q9I4V0Negative2321913 - 232286334075.4
pp_02022SHINM13_20220Not AvailableNegative2322879 - 2324069Not Available
hypothetical proteinSHINM13_20230Not AvailableNegative2324124 - 232479525253.0
membrane protein insertase yidcSHINM13_20240A6L9D2Negative2324909 - 232681372175.0
ctp synthaseSHINM13_20250A5FHA4Negative2326863 - 232847659496.6
hypothetical proteinSHINM13_20260P0AD41Negative2328621 - 23288579304.41
hypothetical proteinSHINM13_20270Not AvailableNegative2328864 - 233004843840.8
gmp synthaseSHINM13_20280A5FHB4Negative2330150 - 233167956540.8

Displaying genes 2071 – 2080 of 2145 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.