Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quercetin 2,3-dioxygenase | NCTC13639_00384 | Not Available | Positive | 341237 - 341932 | 26204.7 |
| gluconate utilization operon repressor | NCTC13639_00385 | Not Available | Positive | 342062 - 343057 | 36522.4 |
| thermoresistant gluconokinase | NCTC13639_00386 | Not Available | Positive | 343199 - 343729 | 19472.2 |
| low affinity gluconate transporter | NCTC13639_00387 | Not Available | Positive | 343729 - 345069 | 46394.0 |
| uncharacterised protein | NCTC13639_00388 | Not Available | Negative | 345165 - 345611 | 16616.1 |
| putative ditp- and xtp- hydrolase | NCTC13639_00390 | Not Available | Negative | 346490 - 347083 | 21581.0 |
| aspartate-semialdehyde dehydrogenase | NCTC13639_00391 | Not Available | Positive | 347275 - 348381 | 40063.3 |
| glycogen branching enzyme | NCTC13639_00392 | Not Available | Positive | 348655 - 350841 | 84189.4 |
| glycogen debranching enzyme | NCTC13639_00393 | Not Available | Positive | 350838 - 352814 | 73822.5 |
| glucose-1-phosphate adenylyltransferase | NCTC13639_00394 | Not Available | Positive | 352829 - 354124 | 48643.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

