Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane assembly protein | NCTC13639_00302 | Not Available | Positive | 267930 - 269990 | 74796.2 |
| major facilitator superfamily protein | NCTC13639_00303 | Not Available | Negative | 270084 - 271406 | 47150.8 |
| inner membrane protein yhjd | NCTC13639_00304 | Not Available | Negative | 271757 - 272782 | 38423.4 |
| lysr family transcriptional regulator | NCTC13639_00305 | Not Available | Negative | 272830 - 273729 | 33374.4 |
| 3-ketoacyl-(acyl-carrier-protein) reductase | NCTC13639_00306 | Not Available | Positive | 273849 - 274607 | 27083.4 |
| transcriptional regulatory protein, c terminal | NCTC13639_00307 | Not Available | Positive | 275130 - 275570 | 17153.9 |
| signal transduction protein | NCTC13639_00308 | Not Available | Positive | 275770 - 276576 | 30323.0 |
| transcriptional regulator | NCTC13639_00309 | Not Available | Positive | 276979 - 277581 | 22459.2 |
| phage-related lysozyme (muraminidase) | NCTC13639_00310 | Not Available | Negative | 277600 - 277950 | 13161.8 |
| acetyltransferase | NCTC13639_00311 | Not Available | Negative | 278089 - 278577 | 18129.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

