Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system protein | NCTC13639_00103 | Not Available | Positive | 85921 - 86778 | 30705.3 |
| selenocysteine synthase | NCTC13639_00104 | Not Available | Positive | 86782 - 87891 | 39479.4 |
| protein of uncharacterised function (duf1341) | NCTC13639_00105 | Not Available | Positive | 87878 - 88621 | 25801.0 |
| transposase | NCTC13639_00106 | Not Available | Positive | 88833 - 89771 | 35384.5 |
| cytoplasmic membrane lipoprotein-28 | NCTC13639_00107 | Not Available | Positive | 89895 - 90713 | 29444.3 |
| uncharacterized inner membrane transporter yicl | NCTC13639_00108 | Not Available | Negative | 90742 - 91644 | 32243.5 |
| putative monooxygenase ycne | NCTC13639_00109 | Not Available | Negative | 91762 - 92067 | 11378.8 |
| quinone oxidoreductase | NCTC13639_00110 | Not Available | Negative | 92069 - 93076 | 36152.4 |
| lysr family transcriptional regulator | NCTC13639_00111 | Not Available | Positive | 93181 - 94083 | 33738.6 |
| dipeptidase | NCTC13639_00112 | Not Available | Negative | 94120 - 94770 | 24918.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

