Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | NCTC13639_05806 | Not Available | Negative | 5379183 - 5379494 | 12372.8 |
| Tail stability protein gp7 | NCTC13639_05807 | Not Available | Positive | 5379648 - 5380409 | 28350.9 |
| Baseplate protein gp24 | NCTC13639_05808 | Not Available | Positive | 5380500 - 5381171 | 24975.4 |
| Tail length protein gp6 | NCTC13639_05809 | Not Available | Positive | 5381174 - 5382154 | 36323.3 |
| Base plate protein gp5 | NCTC13639_05810 | Not Available | Positive | 5382147 - 5382803 | 22796.1 |
| Hrdc | NCTC13639_05811 | Not Available | Positive | 5382870 - 5383778 | 33903.9 |
| Dmt | NCTC13639_05812 | Not Available | Positive | 5383768 - 5385966 | 80947.9 |
| uncharacterised protein | NCTC13639_05813 | Not Available | Negative | 5386178 - 5386471 | 10261.3 |
| Para-like protein | NCTC13639_05814 | Not Available | Negative | 5386468 - 5387163 | 25669.8 |
| Conserved protein of unknown function upfc (paar motif) | NCTC13639_05815 | Not Available | Positive | 5387249 - 5387533 | 9610.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

