Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer pilus assembly protein trae | NCTC13639_06144 | Not Available | Negative | 5647717 - 5648280 | 21201.7 |
| conjugal transfer pilus assembly protein tral | NCTC13639_06145 | Not Available | Negative | 5648300 - 5648605 | 12090.9 |
| pilin precursor | NCTC13639_06146 | Not Available | Negative | 5648607 - 5648966 | 12674.1 |
| conjugal transfer protein tray | NCTC13639_06147 | Not Available | Negative | 5649083 - 5649316 | 8810.76 |
| uncharacterised protein | NCTC13639_06148 | Not Available | Negative | 5649623 - 5649973 | 13772.8 |
| relaxosome protein tram | NCTC13639_06149 | Not Available | Negative | 5650336 - 5650659 | 12239.9 |
| lee-encoded protein | NCTC13639_06150 | Not Available | Positive | 5651199 - 5651585 | 14476.3 |
| antirestriction protein | NCTC13639_06151 | Not Available | Negative | 5651596 - 5652126 | 20062.8 |
| type i restriction-modification system methyltransferase subunit | NCTC13639_06152 | Not Available | Negative | 5652766 - 5653338 | 21413.0 |
| uncharacterised protein | NCTC13639_06153 | Not Available | Negative | 5653289 - 5653678 | 14433.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

