Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_06134 | Not Available | Negative | 5639519 - 5639878 | 13561.2 |
| conjugal transfer pilus assembly protein trau | NCTC13639_06135 | Not Available | Negative | 5639889 - 5640884 | 36576.3 |
| conjugal transfer pilus assembly protein traw | NCTC13639_06136 | Not Available | Negative | 5640881 - 5641516 | 23827.8 |
| conjugal transfer protein trbi | NCTC13639_06137 | Not Available | Negative | 5641516 - 5641980 | 16792.1 |
| conjugal transfer atp-binding protein trac | NCTC13639_06138 | Not Available | Negative | 5641977 - 5644568 | 97954.6 |
| conjugal transfer protein trav | NCTC13639_06139 | Not Available | Negative | 5644579 - 5645193 | 20826.7 |
| uncharacterised protein | NCTC13639_06140 | Not Available | Negative | 5645211 - 5645300 | 2908.57 |
| conjugal transfer protein trar | NCTC13639_06141 | Not Available | Negative | 5645304 - 5645528 | 8735.49 |
| conjugal transfer pilus assembly protein trab | NCTC13639_06142 | Not Available | Negative | 5645639 - 5647000 | 47700.9 |
| conjugal transfer protein trak | NCTC13639_06143 | Not Available | Negative | 5646987 - 5647727 | 26439.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

