Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mercury transport protein merc | NCTC13639_06093 | Not Available | Positive | 5596333 - 5596758 | 14796.5 |
| dihydrolipoamide dehydrogenase | NCTC13639_06094 | Not Available | Positive | 5596797 - 5598482 | 58770.5 |
| transcriptional regulator merd | NCTC13639_06095 | Not Available | Positive | 5598500 - 5598865 | 13026.8 |
| putative mercury resistance protein | NCTC13639_06096 | Not Available | Positive | 5598862 - 5599098 | 8280.29 |
| domain of uncharacterised function (duf3330) | NCTC13639_06097 | Not Available | Positive | 5599164 - 5599376 | 7375.51 |
| site-specific dna recombinase | NCTC13639_06098 | Not Available | Positive | 5599506 - 5600063 | 21221.6 |
| transposase and inactivated derivatives, tnpa family | NCTC13639_06099 | Not Available | Positive | 5600066 - 5603038 | 111065.0 |
| iscro5 transposase | NCTC13639_06100 | Not Available | Positive | 5603117 - 5604121 | 37527.7 |
| phage dna invertase | NCTC13639_06101 | Not Available | Positive | 5604564 - 5605121 | 20618.9 |
| beta-lactamase | NCTC13639_06102 | Not Available | Positive | 5605304 - 5606164 | 31517.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

