Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_06083 | Not Available | Negative | 5587878 - 5588855 | 37160.4 |
| hth-type transcriptional repressor aser | NCTC13639_06084 | Not Available | Positive | 5589146 - 5589499 | 13041.0 |
| transposase and inactivated derivatives, tnpa family | NCTC13639_06085 | Not Available | Negative | 5589554 - 5591350 | 67380.7 |
| amino acid metabolite efflux | NCTC13639_06086 | Not Available | Positive | 5591839 - 5592723 | 31150.6 |
| efflux pump | NCTC13639_06087 | Not Available | Negative | 5592755 - 5593954 | 42243.5 |
| tetracycline repressor protein class b from transposon tn10 | NCTC13639_06088 | Not Available | Positive | 5594033 - 5594710 | 24316.8 |
| uncharacterised protein | NCTC13639_06089 | Not Available | Negative | 5594742 - 5594984 | 8907.68 |
| zinc-responsive transcriptional regulator | NCTC13639_06090 | Not Available | Negative | 5595122 - 5595577 | 16529.9 |
| putative mercuric transport protein | NCTC13639_06091 | Not Available | Positive | 5595649 - 5596014 | 13095.4 |
| periplasmic mercury ion-binding protein | NCTC13639_06092 | Not Available | Positive | 5596030 - 5596305 | 9611.69 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

