Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional activator cusr | NCTC13639_06073 | Not Available | Positive | 5579255 - 5579935 | 25670.1 |
| sensor kinase cuss | NCTC13639_06074 | Not Available | Positive | 5579932 - 5581332 | 52828.3 |
| probable copper-binding protein pcoe precursor | NCTC13639_06075 | Not Available | Positive | 5581541 - 5581975 | 15762.6 |
| phage dna invertase | NCTC13639_06076 | Not Available | Positive | 5582388 - 5582984 | 21762.2 |
| transposase | NCTC13639_06077 | Not Available | Positive | 5583108 - 5584037 | 34787.9 |
| protein of uncharacterised function (duf2913) | NCTC13639_06078 | Not Available | Negative | 5584034 - 5584645 | 22528.9 |
| uncharacterised protein | NCTC13639_06079 | Not Available | Negative | 5584642 - 5585037 | 15864.5 |
| dna polymerase iii subunit epsilon | NCTC13639_06080 | Not Available | Negative | 5585090 - 5585953 | 31731.6 |
| uncharacterized conserved protein | NCTC13639_06081 | Not Available | Negative | 5585946 - 5587061 | 41412.0 |
| uncharacterised protein | NCTC13639_06082 | Not Available | Positive | 5587316 - 5587804 | 19247.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

