Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside/multidrug efflux system | NCTC13639_06063 | Not Available | Positive | 5566928 - 5570074 | 114758.0 |
| protein of uncharacterised function, duf | NCTC13639_06064 | Not Available | Positive | 5570161 - 5570601 | 15508.9 |
| copper exporting atpase | NCTC13639_06065 | Not Available | Positive | 5570720 - 5573173 | 87000.8 |
| protein of uncharacterised function (duf2933) | NCTC13639_06066 | Not Available | Positive | 5573204 - 5573401 | 7326.87 |
| peptidoglycan-binding peptidase | NCTC13639_06067 | Not Available | Negative | 5573432 - 5574172 | 27215.4 |
| probable copper-binding protein pcoe precursor | NCTC13639_06068 | Not Available | Negative | 5574456 - 5574902 | 16395.3 |
| blue copper oxidase precursor (copper efflux oxidase) | NCTC13639_06069 | Not Available | Positive | 5575137 - 5576954 | 67327.3 |
| copper resistance protein b precursor | NCTC13639_06070 | Not Available | Positive | 5576954 - 5577847 | 32694.3 |
| copper resistance protein | NCTC13639_06071 | Not Available | Positive | 5577887 - 5578267 | 13400.5 |
| copper resistance protein | NCTC13639_06072 | Not Available | Positive | 5578272 - 5579201 | 33692.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

