Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid partition protein b | NCTC13639_06053 | Not Available | Negative | 5555479 - 5556450 | 36358.9 |
| plasmid partition protein a | NCTC13639_06054 | Not Available | Negative | 5556447 - 5557652 | 44946.8 |
| chromosome segregation protein | NCTC13639_06055 | Not Available | Positive | 5558260 - 5560086 | 67956.9 |
| uncharacterized protein conserved in bacteria | NCTC13639_06056 | Not Available | Negative | 5560258 - 5560608 | 12876.8 |
| silver-binding protein sile precursor | NCTC13639_06057 | Not Available | Negative | 5560757 - 5561188 | 15289.0 |
| sensor kinase cuss | NCTC13639_06058 | Not Available | Negative | 5561425 - 5562903 | 55862.6 |
| dna-binding transcriptional activator cusr | NCTC13639_06059 | Not Available | Negative | 5562896 - 5563576 | 25307.9 |
| copper/silver efflux system outer membrane protein cusc | NCTC13639_06060 | Not Available | Positive | 5563766 - 5565151 | 51266.8 |
| periplasmic copper-binding protein | NCTC13639_06061 | Not Available | Positive | 5565180 - 5565533 | 12460.9 |
| copper/silver efflux system membrane fusion protein cusb | NCTC13639_06062 | Not Available | Positive | 5565625 - 5566917 | 47813.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

