Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isec14 transposase b | NCTC13639_06032 | Not Available | Negative | 5541677 - 5542447 | 29713.3 |
| uncharacterised protein | NCTC13639_06034 | Not Available | Negative | 5542922 - 5543086 | 5986.19 |
| uncharacterised protein | NCTC13639_06035 | Not Available | Negative | 5543154 - 5543507 | 13663.4 |
| plasmid sos inhibition protein a | NCTC13639_06036 | Not Available | Negative | 5543504 - 5544232 | 28297.8 |
| plasmid sos inhibition protein b | NCTC13639_06037 | Not Available | Negative | 5544229 - 5544660 | 15942.0 |
| uncharacterised protein | NCTC13639_06038 | Not Available | Negative | 5544704 - 5546737 | 75238.9 |
| bacterial protein of uncharacterised function (duf905) | NCTC13639_06039 | Not Available | Negative | 5546808 - 5547116 | 11881.8 |
| single-stranded dna-binding protein | NCTC13639_06040 | Not Available | Negative | 5547103 - 5547657 | 20107.6 |
| uncharacterised protein | NCTC13639_06041 | Not Available | Negative | 5548332 - 5548649 | 11766.0 |
| dna polymerase iii subunit theta | NCTC13639_06042 | Not Available | Negative | 5548684 - 5548944 | 10170.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

