Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tray family | NCTC13639_06022 | Not Available | Negative | 5534903 - 5535058 | 5630.02 |
| uncharacterised protein | NCTC13639_06023 | Not Available | Negative | 5535265 - 5535714 | 17883.9 |
| relaxosome protein tram | NCTC13639_06024 | Not Available | Negative | 5536015 - 5536398 | 14651.5 |
| lee-encoded protein | NCTC13639_06025 | Not Available | Positive | 5536866 - 5537321 | 17404.8 |
| antirestriction protein | NCTC13639_06026 | Not Available | Negative | 5537332 - 5537862 | 20062.8 |
| type i restriction-modification system methyltransferase subunit | NCTC13639_06027 | Not Available | Negative | 5538509 - 5539342 | 31157.6 |
| uncharacterised protein | NCTC13639_06028 | Not Available | Negative | 5539389 - 5539535 | 5343.57 |
| uncharacterised protein | NCTC13639_06029 | Not Available | Negative | 5539630 - 5539977 | 13182.7 |
| uncharacterised protein | NCTC13639_06030 | Not Available | Negative | 5540034 - 5540438 | 15532.7 |
| uncharacterised protein | NCTC13639_06031 | Not Available | Negative | 5541164 - 5541538 | 14014.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

