Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer pilus assembly protein trab | NCTC13639_06012 | Not Available | Negative | 5531422 - 5531697 | 9619.32 |
| conjugal transfer pilus assembly protein trab | NCTC13639_06013 | Not Available | Negative | 5531663 - 5531893 | 7570.94 |
| conjugal transfer pilus assembly protein trab | NCTC13639_06014 | Not Available | Negative | 5532002 - 5532247 | 8720.55 |
| uncharacterised protein | NCTC13639_06015 | Not Available | Negative | 5532247 - 5532588 | 12538.0 |
| conjugal transfer protein trak | NCTC13639_06016 | Not Available | Negative | 5532838 - 5533248 | 14757.0 |
| uncharacterised protein | NCTC13639_06017 | Not Available | Negative | 5533264 - 5533476 | 7456.1 |
| conjugal transfer pilus assembly protein trae | NCTC13639_06018 | Not Available | Negative | 5533585 - 5533740 | 5706.67 |
| conjugal transfer pilus assembly protein trae | NCTC13639_06019 | Not Available | Negative | 5533740 - 5534024 | 10551.9 |
| pilin precursor | NCTC13639_06020 | Not Available | Negative | 5534349 - 5534555 | 7220.25 |
| pilin precursor | NCTC13639_06021 | Not Available | Negative | 5534510 - 5534707 | 7525.36 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

