Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_06002 | Not Available | Negative | 5526259 - 5526399 | 5381.58 |
| uncharacterised protein | NCTC13639_06003 | Not Available | Negative | 5526396 - 5526491 | 3854.8 |
| dna polymerase iii subunit epsilon | NCTC13639_06004 | Not Available | Negative | 5526545 - 5526952 | 14700.2 |
| transposase domain (duf772) | NCTC13639_06005 | Not Available | Positive | 5527006 - 5527536 | 20360.8 |
| transposase dde domain | NCTC13639_06006 | Not Available | Positive | 5527494 - 5528024 | 19856.8 |
| uncharacterised protein | NCTC13639_06007 | Not Available | Positive | 5529088 - 5529504 | 15453.8 |
| uncharacterised protein | NCTC13639_06008 | Not Available | Negative | 5529453 - 5529701 | 9007.96 |
| conjugal transfer atp-binding protein trac | NCTC13639_06009 | Not Available | Negative | 5529702 - 5530322 | 23447.3 |
| conjugal transfer protein trav | NCTC13639_06010 | Not Available | Negative | 5530628 - 5530945 | 11460.2 |
| dnak suppressor protein | NCTC13639_06011 | Not Available | Negative | 5530963 - 5531280 | 11934.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

