Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Recombinase | NCTC13639_05784 | Not Available | Negative | 5363475 - 5364554 | 39530.0 |
| Terminase a protein | NCTC13639_05785 | Not Available | Positive | 5364818 - 5366047 | 45873.3 |
| Attl | Not Available | Not Available | Positive | 5366527 - 5366540 | Not Available |
| Gst-loxp-cre recombinase fusion protein | NCTC13639_05789 | Not Available | Positive | 5369178 - 5370203 | 38616.9 |
| uncharacterised protein | NCTC13639_05790 | Not Available | Positive | 5370285 - 5370605 | 12104.6 |
| Hypothetical protein | NCTC13639_05791 | Not Available | Positive | 5370615 - 5371067 | 16861.4 |
| uncharacterised protein | NCTC13639_05792 | Not Available | Positive | 5371150 - 5371632 | 18294.5 |
| Deoxyuridine 5'-triphosphate nucleotidohydrolase | NCTC13639_05793 | Not Available | Positive | 5371625 - 5372095 | 16752.2 |
| uncharacterised protein | NCTC13639_05794 | Not Available | Positive | 5372097 - 5372771 | 24719.5 |
| uncharacterised protein | NCTC13639_05795 | Not Available | Negative | 5372804 - 5373235 | 15593.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

