Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_05992 | Not Available | Negative | 5520249 - 5520497 | 9502.38 |
| is1 transposase | NCTC13639_05993 | Not Available | Negative | 5521345 - 5521638 | 11424.0 |
| transposase and inactivated derivatives | NCTC13639_05994 | Not Available | Negative | 5521767 - 5522042 | 9897.02 |
| l-ribulose-5-phosphate 4-epimerase | NCTC13639_05995 | Not Available | Negative | 5522513 - 5522788 | 10020.0 |
| l-ribulose-5-phosphate 4-epimerase | NCTC13639_05996 | Not Available | Negative | 5522878 - 5523210 | 12412.5 |
| uncharacterised protein | NCTC13639_05997 | Not Available | Positive | 5523297 - 5523458 | 6165.46 |
| dna-binding transcriptional activator fucr | NCTC13639_05998 | Not Available | Positive | 5523648 - 5524178 | 19845.1 |
| deor family transcriptional regulator | NCTC13639_05999 | Not Available | Positive | 5524120 - 5524452 | 12406.8 |
| transposase | NCTC13639_06000 | Not Available | Positive | 5525135 - 5525341 | 7731.42 |
| uncharacterised protein | NCTC13639_06001 | Not Available | Negative | 5525464 - 5526096 | 22401.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

