Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf2726) | NCTC13639_05981 | Not Available | Positive | 5515142 - 5515531 | 15264.3 |
| conjugal transfer pilus acetylation protein trax | NCTC13639_05982 | Not Available | Positive | 5515528 - 5516256 | 26526.4 |
| uncharacterised protein | NCTC13639_05983 | Not Available | Positive | 5516296 - 5516499 | 7350.2 |
| uncharacterised protein | NCTC13639_05984 | Not Available | Positive | 5516496 - 5516846 | 12716.1 |
| uncharacterised protein | NCTC13639_05985 | Not Available | Positive | 5516843 - 5517532 | 26277.0 |
| uncharacterised protein | NCTC13639_05986 | Not Available | Positive | 5517551 - 5517859 | 11626.5 |
| uncharacterised protein | NCTC13639_05987 | Not Available | Positive | 5517958 - 5518215 | 9437.63 |
| phospholipase d precursor | NCTC13639_05988 | Not Available | Positive | 5518212 - 5518523 | 11575.6 |
| negative regulator of repa1 expression | NCTC13639_05989 | Not Available | Positive | 5518654 - 5518911 | 9606.72 |
| replication-associated protein | NCTC13639_05991 | Not Available | Positive | 5519214 - 5520233 | 39973.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

