Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_05971 | Not Available | Positive | 5506729 - 5506929 | 7326.48 |
| zinc-responsive transcriptional regulator | NCTC13639_05972 | Not Available | Negative | 5506919 - 5507353 | 15764.0 |
| putative mercuric transport protein | NCTC13639_05973 | Not Available | Positive | 5507425 - 5507775 | 12498.8 |
| lead, cadmium, zinc and mercury-transporting atpase | NCTC13639_05974 | Not Available | Positive | 5507788 - 5508063 | 9490.58 |
| dihydrolipoamide dehydrogenase | NCTC13639_05975 | Not Available | Positive | 5508135 - 5509820 | 58731.4 |
| transcriptional regulator merd | NCTC13639_05976 | Not Available | Positive | 5509838 - 5510203 | 13018.7 |
| heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein) | NCTC13639_05977 | Not Available | Positive | 5510432 - 5511421 | 35589.3 |
| site-specific dna recombinase | NCTC13639_05978 | Not Available | Positive | 5511551 - 5512108 | 21221.6 |
| transposase and inactivated derivatives, tnpa family | NCTC13639_05979 | Not Available | Positive | 5512111 - 5514060 | 72751.9 |
| transposase and inactivated derivatives, tnpa family | NCTC13639_05980 | Not Available | Positive | 5514089 - 5515084 | 37206.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

