Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer mating pair stabilization protein trag | NCTC13639_05961 | Not Available | Positive | 5494838 - 5496334 | 54153.0 |
| conjugal transfer mating pair stabilization protein trag | NCTC13639_05962 | Not Available | Positive | 5496511 - 5496774 | 8937.21 |
| conjugal transfer mating pair stabilization protein trag | NCTC13639_05963 | Not Available | Positive | 5497142 - 5497348 | 7719.94 |
| conjugal transfer mating pair stabilization protein trag | NCTC13639_05964 | Not Available | Positive | 5497308 - 5497688 | 14086.1 |
| uncharacterised protein | NCTC13639_05965 | Not Available | Positive | 5497698 - 5498114 | 15727.9 |
| conjugal transfer surface exclusion protein trat | NCTC13639_05966 | Not Available | Positive | 5498456 - 5499193 | 25983.1 |
| dna transport protein trad | NCTC13639_05967 | Not Available | Positive | 5499344 - 5501410 | 78221.5 |
| multifunctional conjugation protein trai | NCTC13639_05968 | Not Available | Positive | 5501410 - 5503077 | 59912.9 |
| multifunctional conjugation protein trai | NCTC13639_05969 | Not Available | Positive | 5503088 - 5505436 | 85352.5 |
| multifunctional conjugation protein trai | NCTC13639_05970 | Not Available | Positive | 5505493 - 5506710 | 44645.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

