Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer atp-binding protein trac | NCTC13639_05951 | Not Available | Positive | 5484889 - 5487480 | 97942.7 |
| conjugal transfer protein trbi | NCTC13639_05952 | Not Available | Positive | 5487477 - 5487941 | 16776.1 |
| conjugal transfer pilus assembly protein traw | NCTC13639_05953 | Not Available | Positive | 5487941 - 5488576 | 23971.0 |
| conjugal transfer pilus assembly protein trau | NCTC13639_05954 | Not Available | Positive | 5488573 - 5489568 | 36644.2 |
| conjugal transfer pilus assembly protein trbc | NCTC13639_05955 | Not Available | Positive | 5489587 - 5490201 | 22373.9 |
| conjugal transfer mating pair stabilization protein tran | NCTC13639_05956 | Not Available | Positive | 5490198 - 5490854 | 23204.0 |
| conjugal transfer mating pair stabilization protein tran | NCTC13639_05957 | Not Available | Positive | 5490871 - 5492028 | 41878.4 |
| conjugal pilus assembly protein traf | NCTC13639_05958 | Not Available | Positive | 5492025 - 5492801 | 29348.7 |
| conjugal transfer protein trbb | NCTC13639_05959 | Not Available | Positive | 5492826 - 5493437 | 21953.5 |
| conjugal transfer pilus assembly protein trah | NCTC13639_05960 | Not Available | Positive | 5493437 - 5494798 | 49239.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

