Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilin precursor | NCTC13639_05941 | Not Available | Positive | 5479751 - 5479882 | 4708.38 |
| conjugal transfer pilus assembly protein tral | NCTC13639_05942 | Not Available | Positive | 5479882 - 5480190 | 12204.1 |
| conjugal transfer pilus assembly protein trae | NCTC13639_05943 | Not Available | Positive | 5480210 - 5480773 | 21168.5 |
| conjugal transfer protein trak | NCTC13639_05944 | Not Available | Positive | 5480763 - 5481503 | 26362.6 |
| conjugal transfer pilus assembly protein trab | NCTC13639_05945 | Not Available | Positive | 5481490 - 5482851 | 47807.2 |
| zinc ion binding protein | NCTC13639_05946 | Not Available | Positive | 5482963 - 5483187 | 8612.28 |
| uncharacterised protein | NCTC13639_05947 | Not Available | Positive | 5483191 - 5483376 | 7014.11 |
| uncharacterised protein | NCTC13639_05948 | Not Available | Positive | 5483360 - 5483776 | 15211.1 |
| uncharacterised protein | NCTC13639_05949 | Not Available | Positive | 5483773 - 5484219 | 16835.8 |
| conjugal transfer protein trav | NCTC13639_05950 | Not Available | Positive | 5484237 - 5484878 | 21869.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

