Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenical pump-driving atpase | NCTC13639_05891 | Not Available | Positive | 5444757 - 5446508 | 63385.0 |
| arsenic efflux pump protein | NCTC13639_05892 | Not Available | Positive | 5446557 - 5446862 | 10820.5 |
| transposase dde domain | NCTC13639_05893 | Not Available | Negative | 5446980 - 5447882 | 34204.0 |
| dna polymerase iii subunit epsilon | NCTC13639_05894 | Not Available | Positive | 5447936 - 5448343 | 14700.2 |
| uncharacterised protein | NCTC13639_05895 | Not Available | Positive | 5448396 - 5448791 | 15838.4 |
| protein of uncharacterised function (duf2913) | NCTC13639_05896 | Not Available | Positive | 5448788 - 5449399 | 22630.1 |
| transposase | NCTC13639_05897 | Not Available | Negative | 5449396 - 5450346 | 36137.9 |
| uncharacterised protein | NCTC13639_05898 | Not Available | Negative | 5450493 - 5450693 | 7595.99 |
| putative resolvase | NCTC13639_05899 | Not Available | Negative | 5450747 - 5451379 | 23513.3 |
| uncharacterised protein | NCTC13639_05900 | Not Available | Positive | 5451802 - 5452305 | 19082.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

