Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf2726) | NCTC13639_05870 | Not Available | Positive | 5426631 - 5427020 | 15264.3 |
| conjugal transfer pilus acetylation protein trax | NCTC13639_05871 | Not Available | Positive | 5426992 - 5427570 | 20890.9 |
| uncharacterised protein | NCTC13639_05872 | Not Available | Positive | 5427592 - 5427744 | 5571.09 |
| uncharacterised protein | NCTC13639_05873 | Not Available | Positive | 5428396 - 5429007 | 23352.4 |
| uncharacterised protein | NCTC13639_05874 | Not Available | Positive | 5429664 - 5429975 | 11659.0 |
| replication-associated protein | NCTC13639_05876 | Not Available | Positive | 5430979 - 5431434 | 17129.5 |
| replication-associated protein | NCTC13639_05877 | Not Available | Positive | 5431379 - 5431759 | 15060.3 |
| is1 transposase | NCTC13639_05878 | Not Available | Negative | 5432844 - 5433377 | 20674.1 |
| l-ribulose-5-phosphate 4-epimerase | NCTC13639_05879 | Not Available | Negative | 5434043 - 5434738 | 25671.7 |
| uncharacterised protein | NCTC13639_05880 | Not Available | Positive | 5434825 - 5434986 | 6165.46 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

