Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_05745 | Not Available | Positive | 5325943 - 5326581 | 24859.3 |
| uncharacterised protein | NCTC13639_05786 | Not Available | Positive | 5366047 - 5367558 | 57105.7 |
| uncharacterised protein | NCTC13639_05787 | Not Available | Negative | 5367587 - 5368621 | 39796.9 |
| uncharacterised protein | NCTC13639_05788 | Not Available | Negative | 5368724 - 5368843 | 4661.87 |
| uncharacterised protein | NCTC13639_05864 | Not Available | Negative | 5421739 - 5422665 | 33125.0 |
| site-specific dna recombinase | NCTC13639_05865 | Not Available | Positive | 5423204 - 5423590 | 14761.0 |
| transposase and inactivated derivatives, tnpa family | NCTC13639_05866 | Not Available | Positive | 5423593 - 5423946 | 13488.3 |
| transposase and inactivated derivatives, tnpa family | NCTC13639_05867 | Not Available | Positive | 5423943 - 5424275 | 12459.1 |
| transposase and inactivated derivatives, tnpa family | NCTC13639_05868 | Not Available | Positive | 5424374 - 5425543 | 43187.6 |
| transposase and inactivated derivatives, tnpa family | NCTC13639_05869 | Not Available | Positive | 5425927 - 5426358 | 16505.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

