Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_05735 | Not Available | Positive | 5319568 - 5320806 | 43846.7 |
| uncharacterised protein | NCTC13639_05736 | Not Available | Positive | 5321443 - 5321730 | 10623.6 |
| zonula occludens toxin | NCTC13639_05737 | Not Available | Positive | 5321734 - 5322444 | 26613.5 |
| zonula occludens toxin | NCTC13639_05738 | Not Available | Positive | 5322414 - 5322767 | 12804.4 |
| type ii secretion system protein d | NCTC13639_05739 | Not Available | Positive | 5322813 - 5323619 | 29658.6 |
| type ii secretory pathway, component hofq | NCTC13639_05740 | Not Available | Positive | 5323616 - 5324026 | 14812.5 |
| probable addiction module antidote protein | NCTC13639_05741 | Not Available | Positive | 5324200 - 5324373 | 6636.86 |
| uncharacterised protein | NCTC13639_05742 | Not Available | Negative | 5324806 - 5324919 | 4625.66 |
| uncharacterised protein | NCTC13639_05743 | Not Available | Negative | 5324930 - 5325268 | 12555.8 |
| uncharacterised protein | NCTC13639_05744 | Not Available | Positive | 5325754 - 5325849 | 3521.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

