Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin | NCTC13639_05725 | Not Available | Negative | 5313560 - 5315116 | 55609.9 |
| uncharacterised protein | NCTC13639_05726 | Not Available | Positive | 5315235 - 5315522 | 10288.3 |
| probable addiction module antidote protein | NCTC13639_05727 | Not Available | Positive | 5315669 - 5315842 | 6636.86 |
| uncharacterised protein | NCTC13639_05728 | Not Available | Negative | 5316398 - 5316733 | 12467.7 |
| uncharacterised protein | NCTC13639_05729 | Not Available | Negative | 5316802 - 5317074 | 10252.2 |
| uncharacterised protein | NCTC13639_05730 | Not Available | Positive | 5317214 - 5317411 | 7341.44 |
| replication initiation factor | NCTC13639_05731 | Not Available | Positive | 5317402 - 5318574 | 45036.2 |
| uncharacterised protein | NCTC13639_05732 | Not Available | Positive | 5318586 - 5318921 | 12378.8 |
| uncharacterised protein | NCTC13639_05733 | Not Available | Positive | 5318998 - 5319222 | 8210.9 |
| uncharacterised protein | NCTC13639_05734 | Not Available | Positive | 5319234 - 5319482 | 8295.34 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

