Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator yidz | NCTC13639_05714 | Not Available | Negative | 5302857 - 5303816 | 36902.9 |
| multidrug efflux system protein mdtl | NCTC13639_05715 | Not Available | Negative | 5303785 - 5304966 | 41909.7 |
| trna modification gtpase trme | NCTC13639_05716 | Not Available | Negative | 5305149 - 5306513 | 49141.6 |
| putative inner membrane protein translocase component yidc | NCTC13639_05717 | Not Available | Negative | 5306619 - 5308265 | 61577.3 |
| ribonuclease p | NCTC13639_05718 | Not Available | Negative | 5308489 - 5308815 | 12461.3 |
| 50s ribosomal protein l34 | NCTC13639_05719 | Not Available | Negative | 5308866 - 5309006 | 5409.74 |
| dna relaxase mbea | NCTC13639_05720 | Not Available | Negative | 5310029 - 5311540 | 55597.0 |
| conjugative accessory protein mbec | NCTC13639_05721 | Not Available | Negative | 5311530 - 5311874 | 12700.5 |
| colicin s4 lysis protein | NCTC13639_05723 | Not Available | Negative | 5312815 - 5312970 | 5088.41 |
| colicin immunity protein | NCTC13639_05724 | Not Available | Positive | 5313004 - 5313540 | 20464.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

