Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit alpha | NCTC13639_05693 | Not Available | Positive | 5280408 - 5281949 | 55305.4 |
| f0f1 atp synthase subunit gamma | NCTC13639_05694 | Not Available | Positive | 5282000 - 5282428 | 15474.0 |
| f0f1 atp synthase subunit gamma | NCTC13639_05695 | Not Available | Positive | 5282466 - 5282864 | 14756.6 |
| f0f1 atp synthase subunit beta | NCTC13639_05696 | Not Available | Positive | 5282891 - 5284273 | 50257.5 |
| f0f1 atp synthase subunit epsilon | NCTC13639_05697 | Not Available | Positive | 5284294 - 5284713 | 15059.3 |
| bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase | NCTC13639_05699 | Not Available | Positive | 5285363 - 5286733 | 49264.2 |
| glucosamine--fructose-6-phosphate aminotransferase | NCTC13639_05700 | Not Available | Positive | 5286958 - 5288787 | 66807.3 |
| major fimbrial subunit | NCTC13639_05701 | Not Available | Positive | 5289226 - 5289798 | 19858.2 |
| fimbrial chaperone protein | NCTC13639_05702 | Not Available | Positive | 5289913 - 5290599 | 25440.0 |
| fimbrial usher protein | NCTC13639_05703 | Not Available | Positive | 5290621 - 5293137 | 92809.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

