Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthetase asna | NCTC13639_05683 | Not Available | Negative | 5272085 - 5273077 | 36614.6 |
| dna-binding transcriptional regulator asnc | NCTC13639_05684 | Not Available | Positive | 5273229 - 5273687 | 16952.7 |
| flavodoxin | NCTC13639_05685 | Not Available | Positive | 5273776 - 5274225 | 16217.1 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme gida | NCTC13639_05686 | Not Available | Positive | 5274599 - 5276488 | 69831.6 |
| 16s rrna methyltransferase gidb | NCTC13639_05687 | Not Available | Positive | 5276590 - 5277213 | 23364.3 |
| f0f1 atp synthase subunit i | NCTC13639_05688 | Not Available | Positive | 5277828 - 5278208 | 13700.7 |
| f0f1 atp synthase subunit a | NCTC13639_05689 | Not Available | Positive | 5278216 - 5279031 | 30383.2 |
| f0f1 atp synthase subunit c | NCTC13639_05690 | Not Available | Positive | 5279078 - 5279317 | 8238.67 |
| f0f1 atp synthase subunit b | NCTC13639_05691 | Not Available | Positive | 5279377 - 5279847 | 17278.9 |
| f0f1 atp synthase subunit delta | NCTC13639_05692 | Not Available | Positive | 5279862 - 5280395 | 19484.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

