Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | NCTC13639_05673 | Not Available | Positive | 5259470 - 5260987 | 54602.9 |
| uncharacterised protein | NCTC13639_05674 | Not Available | Positive | 5260987 - 5261358 | 14493.9 |
| ribokinase | NCTC13639_05675 | Not Available | Negative | 5261860 - 5262789 | 32047.1 |
| d-ribose transporter subunit rbsb | NCTC13639_05676 | Not Available | Negative | 5262931 - 5263821 | 30939.3 |
| ribose abc transporter permease protein | NCTC13639_05677 | Not Available | Negative | 5263846 - 5264811 | 33341.9 |
| d-ribose transporter atp binding protein | NCTC13639_05678 | Not Available | Negative | 5264817 - 5266367 | 56788.4 |
| ribose transport/metabolism protein | NCTC13639_05679 | Not Available | Negative | 5266330 - 5266749 | 15314.4 |
| potassium transport protein kup | NCTC13639_05680 | Not Available | Negative | 5266942 - 5268810 | 69382.4 |
| regulatory atpase rava | NCTC13639_05681 | Not Available | Positive | 5269140 - 5270636 | 56612.3 |
| protein viaa (vwa domain protein interacting with aaa atpase) | NCTC13639_05682 | Not Available | Positive | 5270630 - 5272081 | 55861.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

