Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | NCTC13639_05659 | Not Available | Negative | 5247181 - 5247540 | 13870.7 |
| acetolactate synthase 2 regulatory subunit | NCTC13639_05660 | Not Available | Negative | 5247558 - 5247821 | 9724.75 |
| acetolactate synthase 2 catalytic subunit | NCTC13639_05661 | Not Available | Negative | 5247818 - 5249464 | 59222.4 |
| competence protein comm | NCTC13639_05662 | Not Available | Positive | 5250056 - 5251576 | 55092.3 |
| uncharacterized protein conserved in bacteria | NCTC13639_05663 | Not Available | Negative | 5251602 - 5251940 | 13174.3 |
| transcriptional regulator hdfr | NCTC13639_05664 | Not Available | Positive | 5252059 - 5252892 | 31577.5 |
| Trna-trp | Not Available | Not Available | Positive | 5252992 - 5253067 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 5253120 - 5253196 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 5256584 - 5256659 | Not Available |
| gntr family transcriptional regulator | NCTC13639_05672 | Not Available | Positive | 5258764 - 5259468 | 26583.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

